The detailed information of tRNA gene sequence


Sequence ID>WENV170708360
Genome IDLNAP01073089
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 877
End posion on genome 969
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgcacacac
tRNA gene sequence 
GGAGAGATGGCCGAGTAGGTCGAAGGCGCTCGCCTGCTAAGCGAGTATACTGGGAAACCG
GTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ccatccccat
Secondary structure (Cloverleaf model)
>WENV170708360	Ser	GCT
                   c      GCCA ccatccccat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    A T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TATACTGGGAAACCGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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