The detailed information of tRNA gene sequence


Sequence ID>WENV170708368
Genome IDLNAP01074571
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 264
End posion on genome 339
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actccggcct
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTAGGTTCGAGT
CCTACTGCCCCTGCCA
Downstream region at tRNA end position 
ggccggcatt
Secondary structure (Cloverleaf model)
>WENV170708368	Trp	CCA
                   t      GCCA ggccggcatt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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