The detailed information of tRNA gene sequence


Sequence ID>WENV170708471
Genome IDLNAP01085418
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 744
End posion on genome 671
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agtctcctcg
tRNA gene sequence 
GGCGAGGTAGCAAAGCGGTTATGCAGCGGCCTGCAAAGCCGTCTAGACGGGTTCGACTCC
CGTCCTCGCCTCCA
Downstream region at tRNA end position 
atcttccctc
Secondary structure (Cloverleaf model)
>WENV170708471	Cys	GCA
                   g      TCCA atcttccctc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     T G C C C     A
        G A        A      | | | | |     G
      C     A A C G       A C G G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     CTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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