The detailed information of tRNA gene sequence


Sequence ID>WENV170708515
Genome IDLNAP01090271
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 658
End posion on genome 568
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttggaaatgc
tRNA gene sequence 
GGAAAGGTACCCAAGAGGCCCAAGGGGGCTGACTCGAAATCAGCTAGGCGGCTCGCGCCG
TGCGTGGGTTCGAATCCCACTCTTTCCGCCA
Downstream region at tRNA end position 
cttacattaa
Secondary structure (Cloverleaf model)
>WENV170708515	Ser	CGA
                   c      GCCA cttacattaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      A G A        A      | | | | |     G
    G       A C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      C C A        G     TAGGCGGCTCGCGCCGTGC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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