The detailed information of tRNA gene sequence


Sequence ID>WENV170708522
Genome IDLNAP01091038
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 444
End posion on genome 359
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggttcatttt
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTAATGGCAGCAGACTGTAAATCTGCCCTCTAACGAGTACGC
TGGTTCGAATCCAGCCTCCTCCACCA
Downstream region at tRNA end position 
atgaggcgat
Secondary structure (Cloverleaf model)
>WENV170708522	Tyr	GTA
                   t      ACCA atgaggcgat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G       + | | |                 T T
    T       T G G C
      T A A        A     CCTCTAACGAGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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