The detailed information of tRNA gene sequence


Sequence ID>WENV170708809
Genome IDLNAQ01001410
Search identical group
Phylum/Class[LNAQ] soil metagenome; soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1122
End posion on genome 1047
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccaaggtttt
tRNA gene sequence 
GACCCCATCGTCTAGAGGCCTAGGACATCACCCTTTCACGGTGAGTACCGGGGTTCGAAT
CCCCGTGGGGTCGCCA
Downstream region at tRNA end position 
agttgtagcg
Secondary structure (Cloverleaf model)
>WENV170708809	Glu	TTC
                   t      GCCA agttgtagcg
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GTAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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