The detailed information of tRNA gene sequence


Sequence ID>WENV170708913
Genome IDLNFM01000025
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 33146
End posion on genome 33049
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
caaattatcc
tRNA gene sequence 
GGAGGCGCGGCTTGTCCGGTGATGGGCACGGTCTTCAAAACCGTTGTGAGGGCGCGAGAG
CGTACTCAGGTGGGTTCGACTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
atttagtgaa
Secondary structure (Cloverleaf model)
>WENV170708913	SeC(p)	TCA
                   c      GCCA atttagtgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T C
                    G     C A C C C     A
      C C T        G      | | | | |     G
    G       G T T C       G T G G G     C
    G       + + + |                 T T
    T       T G G G
      G A          C     TGTGAGGGCGCGAGAGCGTACTCAG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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