The detailed information of tRNA gene sequence


Sequence ID>WENV170709009
Genome IDLNFM01000068
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 119574
End posion on genome 119485
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacaacaatt
tRNA gene sequence 
AGAGAGGTGTCCGAGTGGTTGAAGGAGCAAGCCTGGAAAGTTTGTATATGGGTAACTGTA
TCGTGGGTTCGAATCCCATCCTCTCTGCAA
Downstream region at tRNA end position 
ttaatactga
Secondary structure (Cloverleaf model)
>WENV170709009	Ser	GGA
                   t      GCAA ttaatactga
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATATGGGTAACTGTATC
                    C - G
                    A - T
                    A - T
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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