The detailed information of tRNA gene sequence


Sequence ID>WENV170709022
Genome IDLNFM01000071
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 158502
End posion on genome 158592
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataaattca
tRNA gene sequence 
GGAGAGATGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTAGGTTCATAGCCT
ACCGGGGGTTCGAATCCCCCTTTCTCCGCCA
Downstream region at tRNA end position 
aaatacaaat
Secondary structure (Cloverleaf model)
>WENV170709022	Ser	GGA
                   a      GCCA aaatacaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G G G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTAGGTTCATAGCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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