The detailed information of tRNA gene sequence


Sequence ID>WENV170709043
Genome IDLNFM01000079
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 92440
End posion on genome 92350
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtggcagat
tRNA gene sequence 
GGAGACGTGGCTGAGCGGCTGAAAGCGGCGGTTTGCTAAATCGTTGTAGTCCAAAAGACT
ACCACAGGTTCGAATCCTGTCGTCTCCGCCA
Downstream region at tRNA end position 
tcaatatcag
Secondary structure (Cloverleaf model)
>WENV170709043	Ser	GCT
                   t      GCCA tcaatatcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     G
    G       G T C G       A C A G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TGTAGTCCAAAAGACTACC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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