The detailed information of tRNA gene sequence


Sequence ID>WENV170709054
Genome IDLNFM01000084
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 178277
End posion on genome 178370
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taggagccac
tRNA gene sequence 
GGAGCTGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGCTTGTAAAGG
CGTATCGAGGGTTCGAATCCCTCCGGCTCCGCCA
Downstream region at tRNA end position 
ctctacacag
Secondary structure (Cloverleaf model)
>WENV170709054	Ser	GCT
                   c      GCCA ctctacacag
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGCTTGTAAAGGCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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