The detailed information of tRNA gene sequence


Sequence ID>WENV170709157
Genome IDLNFM01000140
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 251740
End posion on genome 251651
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acgccgcgtt
tRNA gene sequence 
GGATGGGTGGCCGAGTGGTTTAAGGCACCGGTCTTGAAAACCGGCGAGGGTGAAAGCCCT
CCGTGGGTTCGAATCCCACCCCATCCGCCA
Downstream region at tRNA end position 
cgcggctcgc
Secondary structure (Cloverleaf model)
>WENV170709157	Ser	TGA
                   t      GCCA cgcggctcgc
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGAGGGTGAAAGCCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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