The detailed information of tRNA gene sequence


Sequence ID>WENV170709171
Genome IDLNFM01000153
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 163363
End posion on genome 163452
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcaaacagc
tRNA gene sequence 
GGAGGTGTGGCAGAGCGGTTGAATGCACCAGTCTTGAAAACTGGCGATGTCGCAAGGCAT
CCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
aaacaacaaa
Secondary structure (Cloverleaf model)
>WENV170709171	Ser	TGA
                   c      GCCA aaacaacaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGATGTCGCAAGGCATCC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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