The detailed information of tRNA gene sequence


Sequence ID>WENV170709194
Genome IDLNFM01000176
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 151430
End posion on genome 151341
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttcccacac
tRNA gene sequence 
GGAGAGATGGATGAGCGGTTTAAGTCACCACCCTGGAAAGGTGGCACAGGGGCAACTCTG
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaattcttga
Secondary structure (Cloverleaf model)
>WENV170709194	Ser	GGA
                   c      GCCA aaattcttga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G A G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        A     CACAGGGGCAACTCTGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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