The detailed information of tRNA gene sequence


Sequence ID>WENV170709199
Genome IDLNFM01000178
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 75871
End posion on genome 75947
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttgtcttt
tRNA gene sequence 
GCGGGCGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCAAG
TCCCGTCGCTCGCGCCA
Downstream region at tRNA end position 
ttgtttacaa
Secondary structure (Cloverleaf model)
>WENV170709199	Asp	GTC
                   t      GCCA ttgtttacaa
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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