The detailed information of tRNA gene sequence


Sequence ID>WENV170709207
Genome IDLNFM01000181
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 124205
End posion on genome 124292
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcggcccaca
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCGGCCCGCAAGGGCCC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
aggcccatga
Secondary structure (Cloverleaf model)
>WENV170709207	Ser	TGA
                   a      GCCA aggcccatga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGGCCCGCAAGGGCCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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