The detailed information of tRNA gene sequence


Sequence ID>WENV170709232
Genome IDLNFM01000206
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 133019
End posion on genome 132930
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgcgcgaac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGGGTGCAAGCCCA
CCGTGAGTTCGAATCTCACTCTCTCCGCCA
Downstream region at tRNA end position 
gtccttctat
Secondary structure (Cloverleaf model)
>WENV170709232	Ser	TGA
                   c      GCCA gtccttctat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGTGCAAGCCCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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