The detailed information of tRNA gene sequence


Sequence ID>WENV170709273
Genome IDLNFM01000229
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 47918
End posion on genome 47842
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgctttataa
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
tagcgtggac
Secondary structure (Cloverleaf model)
>WENV170709273	Asp	GTC
                   a      GCCA tagcgtggac
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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