The detailed information of tRNA gene sequence


Sequence ID>WENV170709288
Genome IDLNFM01000241
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 55122
End posion on genome 55214
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgtcgcttaT
tRNA gene sequence 
GGAGGGGTGGCCGAGTCCGGTTGATGGCAACAGTCTTGAAAACTGTCAGGGGGGAAACCT
CCTCGCGAGTTCGAATCTCGCTCCCTCCGCCC
Downstream region at tRNA end position 
tttttaaaat
Secondary structure (Cloverleaf model)
>WENV170709288	Ser	TGA
                   T      GCCC tttttaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G C T C     A
    C T G A        G      | | | | |     G
  C         G C C G       G C G A G     C
  G         + | | |                 T T
  G         T G G C
    T T G A        A     CAGGGGGGAAACCTCCTC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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