The detailed information of tRNA gene sequence


Sequence ID>WENV170709473
Genome IDLNFM01000371
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 80230
End posion on genome 80322
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgccccctcc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGCCATAACGGCGCTGACTCGAAATCAGATGGTCGGGGAAACCC
GGCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aatgaaacgg
Secondary structure (Cloverleaf model)
>WENV170709473	Ser	CGA
                   c      GCCA aatgaaacgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  C           | | |                 T T
  C         A C G G
    A T A          C     TGGTCGGGGAAACCCGGCAC
                    G   A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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