The detailed information of tRNA gene sequence


Sequence ID>WENV170709492
Genome IDLNFM01000389
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 109823
End posion on genome 109915
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcgcgtaac
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGCTCTCAAGGC
GTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
cagccgagaa
Secondary structure (Cloverleaf model)
>WENV170709492	Ser	GCT
                   c      GCCA cagccgagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGCTCTCAAGGCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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