The detailed information of tRNA gene sequence


Sequence ID>WENV170709646
Genome IDLNFM01000560
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 6029
End posion on genome 6123
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgtcgcctgG
tRNA gene sequence 
GGAGGAGAATTGGTCCCGGTGGGCCATCCGGACTTCAAATCCGGAGAGGGTCGCAAGACG
GCTCTTGGTAGGTTCGACTCCTGCCTCCTCCGCCa
Downstream region at tRNA end position 
cgccagcccc
Secondary structure (Cloverleaf model)
>WENV170709646	SeC(p)	TCA
                   G      GCCa cgccagcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    A     C G T C C     A
      C C T        A      | + | | |     G
    C       G G T T       G T A G G     C
    G         |   |                 T T
    G       G C C A
      T G G        T     AGAGGGTCGCAAGACGGCTCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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