The detailed information of tRNA gene sequence


Sequence ID>WENV170709759
Genome IDLNFM01000670
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 66365
End posion on genome 66454
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccaaagcgg
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAACGCGTGTGTAGGGGAAACTCTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
atctttcact
Secondary structure (Cloverleaf model)
>WENV170709759	Ser	GGA
                   g      GCCA atctttcact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTAGGGGAAACTCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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