The detailed information of tRNA gene sequence


Sequence ID>WENV170709807
Genome IDLNFM01000757
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 884
End posion on genome 793
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcggcagac
tRNA gene sequence 
GGAGCTGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAATCGTCATACGCTTCACGGCG
TATCCAGGGTTCGAATCCCTGCGGCTCCGCCA
Downstream region at tRNA end position 
tcttagcttt
Secondary structure (Cloverleaf model)
>WENV170709807	Ser	GCT
                   c      GCCA tcttagcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACGCTTCACGGCGTATC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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