The detailed information of tRNA gene sequence


Sequence ID>WENV170709938
Genome IDLNFM01000946
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 55189
End posion on genome 55265
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccctcagcgc
tRNA gene sequence 
GCGGTGGTAGCTCAGTTGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCACCGCGCCA
Downstream region at tRNA end position 
gttttcccca
Secondary structure (Cloverleaf model)
>WENV170709938	Asp	GTC
                   c      GCCA gttttcccca
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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