The detailed information of tRNA gene sequence


Sequence ID>WENV170709968
Genome IDLNFM01001004
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 9553
End posion on genome 9464
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagcgcgccc
tRNA gene sequence 
GGAGGAGTGGCCGAGCGGTTGATGGCGGCGGACTTGAAATCCGTTGTGCTCGAAAGGGTA
CCGGGGGTTCGAATCCCTCCTCCTCCGCCA
Downstream region at tRNA end position 
gcagggggtt
Secondary structure (Cloverleaf model)
>WENV170709968	Ser	TGA
                   c      GCCA gcagggggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    T       T G G C
      T G A        G     TGTGCTCGAAAGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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