The detailed information of tRNA gene sequence


Sequence ID>WENV170709969
Genome IDLNFM01001005
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 12405
End posion on genome 12316
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acgctaatct
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATCGCGCTACCTTGGAAAGGTAGTATCGGGGCAACCCGA
TCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
aatcgtgcta
Secondary structure (Cloverleaf model)
>WENV170709969	Ser	GGA
                   t      GCCA aatcgtgcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TATCGGGGCAACCCGATC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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