The detailed information of tRNA gene sequence


Sequence ID>WENV170710082
Genome IDLNFM01001129
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 66687
End posion on genome 66598
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttagtttaat
tRNA gene sequence 
GGAAGCATGGCAGAGTGGTCTATTGCACTGACTTGGAAAGTCAGAGGGTCAGAAATGGCC
CCGTGAGTTCGAATCTCACTGCTTCCTCCA
Downstream region at tRNA end position 
tcagtttatt
Secondary structure (Cloverleaf model)
>WENV170710082	Ser	GGA
                   t      TCCA tcagtttatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C T A        A     AGGGTCAGAAATGGCCCC
                    C - G
                    T - A
                    G - C
                    A - T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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