The detailed information of tRNA gene sequence


Sequence ID>WENV170710103
Genome IDLNFM01001146
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 48922
End posion on genome 48846
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgattcttt
tRNA gene sequence 
GGCGGAGTAGTTTAATCGGACAAAATCCCGGCCTCATAAGCCGAAGACTGCAGGTTCGAG
TCCTGCCTCCGCAACCA
Downstream region at tRNA end position 
tttttcgcga
Secondary structure (Cloverleaf model)
>WENV170710103	Met	CAT
                   t      ACCA tttttcgcga
                     G   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    C       T T T G       G C A G G     C
    G       | | | +                 T T
    G       A A A T
      A C A        C     AGACT
                    C   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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