The detailed information of tRNA gene sequence


Sequence ID>WENV170710129
Genome IDLNFM01001198
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 2279
End posion on genome 2353
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcgttcgcac
tRNA gene sequence 
GCTCCCTTCGTCTAGCGGTTAGGACGCGGCCCTCTCAAGGCTGAAACAGGGGTTCGATTC
CCCTAGGGAGCGCCA
Downstream region at tRNA end position 
gcgcattcag
Secondary structure (Cloverleaf model)
>WENV170710129	Glu	CTC
                   c      GCCA gcgcattcag
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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