The detailed information of tRNA gene sequence


Sequence ID>WENV170710145
Genome IDLNFM01001209
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 58036
End posion on genome 58111
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgtccgcgt
tRNA gene sequence 
AGGGGTATAGCTCAGCTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGAGGGTTCGAAA
CCTTCTGCCCCTGCCA
Downstream region at tRNA end position 
ttatcatcgc
Secondary structure (Cloverleaf model)
>WENV170710145	Trp	CCA
                   t      GCCA ttatcatcgc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          A A
                    T     C T T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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