The detailed information of tRNA gene sequence


Sequence ID>WENV170710228
Genome IDLNFM01001340
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 13595
End posion on genome 13501
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccctgcggcg
tRNA gene sequence 
TGGAGGAGAATTGGTCCCGGTGGGCCATCCGGACTTCAAATCCGGAGAGGGTCGCAAGAC
GGCTCTTGGTGGGTTCAACTCCTGCCTCCTCCGCCaa
Downstream region at tRNA end position 
tcctccgagt
Secondary structure (Cloverleaf model)
>WENV170710228	SeC(p)	TCA
                   g      CCaa tcctccgagt
                     T + G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    A     C G T C C     A
      C C T        A      | + + | |     A
    C       G G T T       G T G G G     C
    G         |   |                 T T
    G       G C C A
      T G G        T     AGAGGGTCGCAAGACGGCTCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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