The detailed information of tRNA gene sequence


Sequence ID>WENV170710371
Genome IDLNFM01001627
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 62778
End posion on genome 62702
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gcgcctcggt
tRNA gene sequence 
CGGGCAGTAGCGCAGCCTGGTAGCGCATCAGTCTGGGGGACTGGGGGTCGTGGGTTCGAA
TCCCGCCTGCCCGACCA
Downstream region at tRNA end position 
tcacctcgtc
Secondary structure (Cloverleaf model)
>WENV170710371	Pro	GGG
                   t      ACCA tcacctcgtc
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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