The detailed information of tRNA gene sequence


Sequence ID>WENV170710418
Genome IDLNFM01001708
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 2317
End posion on genome 2406
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcgccccac
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGTGTAAACGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
agtctcagca
Secondary structure (Cloverleaf model)
>WENV170710418	Ser	GGA
                   c      GCCA agtctcagca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTGTAAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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