The detailed information of tRNA gene sequence


Sequence ID>WENV170710522
Genome IDLNFM01001954
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 24268
End posion on genome 24193
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gggtgggtct
tRNA gene sequence 
AGGAGTTTAGCTCAGCTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGGTTCGAGT
CCCTCAACTCCTGCCA
Downstream region at tRNA end position 
tcctcggctt
Secondary structure (Cloverleaf model)
>WENV170710522	Trp	CCA
                   t      GCCA tcctcggctt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A          T G
                    T     C T C C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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