The detailed information of tRNA gene sequence


Sequence ID>WENV170710556
Genome IDLNFM01002029
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 14539
End posion on genome 14634
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgcgccgcac
tRNA gene sequence 
GGAGGCGCTCGACGTGCTGGTGCTGTCCCCGGTCTTCAAAACCGGTGTGGGGTGCGAGGA
GCATCTTGGGCAGGTTCGATTCCTGTGCGCCTCCGCtg
Downstream region at tRNA end position 
cggagggctc
Secondary structure (Cloverleaf model)
>WENV170710556	SeC(p)	TCA
                   c      GCtg cggagggctc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    T     T G T C C     A
      C G T        C      + | | | |     G
    T       G C A G       G C A G G     C
    G       + | | |                 T T
    G       T G T C
      T G C        C     TGTGGGGTGCGAGGAGCATCTTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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