The detailed information of tRNA gene sequence


Sequence ID>WENV170710585
Genome IDLNFM01002083
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 20292
End posion on genome 20203
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcgtccacc
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTCGAAGGCAGCGGTTTTGAAAACCGCCGAACCCGTAAGGGTT
CCAGGGGTTCGAATCCCTTCTCCTCCGCTA
Downstream region at tRNA end position 
tagcgacgcc
Secondary structure (Cloverleaf model)
>WENV170710585	Ser	TGA
                   c      GCTA tagcgacgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CGAACCCGTAAGGGTTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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