The detailed information of tRNA gene sequence


Sequence ID>WENV170710590
Genome IDLNFM01002101
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 42496
End posion on genome 42586
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtcgacagc
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTGAAGGCGCACGCCTGGAACGCGTGTATAGGTTAATAGCCT
ATCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gtccaaggcc
Secondary structure (Cloverleaf model)
>WENV170710590	Ser	GGA
                   c      GCCA gtccaaggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGTTAATAGCCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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