The detailed information of tRNA gene sequence


Sequence ID>WENV170710626
Genome IDLNFM01002214
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 39815
End posion on genome 39891
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatcttttgc
tRNA gene sequence 
GGGGTCGTAGTTCAGTTGGTTAGAACGCCAGCCTGTCACGTTGGAGGTCGCGGGTTCGAG
TCCCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ttcgaaataa
Secondary structure (Cloverleaf model)
>WENV170710626	Asp	GTC
                   c      GCCA ttcgaaataa
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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