The detailed information of tRNA gene sequence


Sequence ID>WENV170710713
Genome IDLNFM01002460
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 5535
End posion on genome 5624
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctaccccagc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGATCGGGGCGGTCTCGAAAACCGTTGTGCGTGCAAGCGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tccttcaccc
Secondary structure (Cloverleaf model)
>WENV170710713	Ser	CGA
                   c      GCCA tccttcaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGTGCGTGCAAGCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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