The detailed information of tRNA gene sequence


Sequence ID>WENV170710902
Genome IDLNFM01002971
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 48815
End posion on genome 48889
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaccacacga
tRNA gene sequence 
GAGTCTATAGCTCAACGGTAGAGCCGGCTGCTCATAACAGCCTTGTTGTAGGTTCGAATC
CTGCTGGACTCACCA
Downstream region at tRNA end position 
cgaaattggc
Secondary structure (Cloverleaf model)
>WENV170710902	Met	CAT
                   a      ACCA cgaaattggc
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     T + G
                     A - T          T A
                    T     C G T C C     A
        A A        A      | + | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        C     TTGTT
                    G - C
                    G - C
                    C - G
                    T - A
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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