The detailed information of tRNA gene sequence


Sequence ID>WENV170710916
Genome IDLNFM01002986
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 332
End posion on genome 242
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtcgacgac
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTGAAGGCGCACGCCTGGAACGCGTGTATAGGTTAATAGCCT
ATCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ctcctgaagc
Secondary structure (Cloverleaf model)
>WENV170710916	Ser	GGA
                   c      GCCA ctcctgaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGTTAATAGCCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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