The detailed information of tRNA gene sequence


Sequence ID>WENV170711020
Genome IDLNFM01003294
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 2769
End posion on genome 2682
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctctcacccc
tRNA gene sequence 
GGAAGAGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCAACGGGCAACCGTTC
GTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
attcaggtcc
Secondary structure (Cloverleaf model)
>WENV170711020	Ser	TGA
                   c      GCCA attcaggtcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CAACGGGCAACCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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