The detailed information of tRNA gene sequence


Sequence ID>WENV170711054
Genome IDLNFM01003399
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 23037
End posion on genome 22948
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttcgcgtt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCGCCCCTGCTAAGGGCGTATACCTTTACGGGTA
TCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
cgaatttttc
Secondary structure (Cloverleaf model)
>WENV170711054	Ser	GCT
                   t      GCCA cgaatttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCTTTACGGGTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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