The detailed information of tRNA gene sequence


Sequence ID>WENV170711107
Genome IDLNFM01003564
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 33266
End posion on genome 33358
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catcgacagc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGAAGGCGCTCGCCTGGAAAGCGGGTATACGGTCAAAAGCC
GTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
agactatttc
Secondary structure (Cloverleaf model)
>WENV170711107	Ser	GGA
                   c      GCCA agactatttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGTCAAAAGCCGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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