The detailed information of tRNA gene sequence


Sequence ID>WENV170711109
Genome IDLNFM01003566
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 2353
End posion on genome 2262
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcttcgcgc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTTAAGGCGGCGGTTTGCTAAATCGTTGTACTGGGAAACTGG
TACCGGAGGTTCGAATCCTCTCGTCTCCGCCA
Downstream region at tRNA end position 
taacatattg
Secondary structure (Cloverleaf model)
>WENV170711109	Ser	GCT
                   c      GCCA taacatattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G G A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTACTGGGAAACTGGTACC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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