The detailed information of tRNA gene sequence


Sequence ID>WENV170711211
Genome IDLNFM01004023
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 20026
End posion on genome 20102
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcgcaaatac
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCAAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ctttcctcaa
Secondary structure (Cloverleaf model)
>WENV170711211	Asp	GTC
                   c      GCCA ctttcctcaa
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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