The detailed information of tRNA gene sequence


Sequence ID>WENV170711235
Genome IDLNFM01004162
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 33641
End posion on genome 33565
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcgcaatcac
tRNA gene sequence 
GCGGGAGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCTCTCGCGCCA
Downstream region at tRNA end position 
ttgaatctgt
Secondary structure (Cloverleaf model)
>WENV170711235	Asp	GTC
                   c      GCCA ttgaatctgt
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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