The detailed information of tRNA gene sequence


Sequence ID>WENV170711244
Genome IDLNFM01004204
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 14485
End posion on genome 14575
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcggcatgc
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTGAAGGCGCACGCCTGGAACGCGTGTATAGGTTAATAGCCT
ATCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
agcaatcttc
Secondary structure (Cloverleaf model)
>WENV170711244	Ser	GGA
                   c      GCCA agcaatcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGTTAATAGCCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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