The detailed information of tRNA gene sequence


Sequence ID>WENV170711281
Genome IDLNFM01004331
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 13229
End posion on genome 13140
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgagcccgcc
tRNA gene sequence 
GGAGAGATGGATGAGCGGTTTAAGTCACCACCCTGGAAAGGTGGCACAGGGTTTACCCTG
TCGAGAGTTCGAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ccatcttagc
Secondary structure (Cloverleaf model)
>WENV170711281	Ser	GGA
                   c      GCCA ccatcttagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G T A G       G A G A G     C
    G         + | |                 T T
    T       A G T C
      T T A        A     CACAGGGTTTACCCTGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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